BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014H05LP1|AL426749
(432 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1241 745 0.0
>3x_Contig1241
Length = 5349
Score = 745 bits (375), Expect = 0.0
Identities = 394/399 (98%), Gaps = 1/399 (0%)
Strand = Plus / Minus
Query: 4 cagtttgtttaacaatgtgtttc-attattgatactttagagatttctgttattggtaaa 62
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 620 cagtttgtttaacaatgtgtttccattattgatactttagagatttctgttattggtaaa 561
Query: 63 caaattgaaagccgtgtggtacgcttgtttctgagccacttccacaaaagaggaaaaaca 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 caaattgaaagccgtgtggtacgcttgtttctgagccacttccacaaaagaggaaaaaca 501
Query: 123 ccacaaatgatgggaagaaaatataggtcacgtgcattcacgtgactcgcaccttacaca 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ccacaaatgatgggaagaaaatataggtcacgtgcattcacgtgactcgcaccttacaca 441
Query: 183 atcaaagtccctggcccattgtgttcgtttgcgttgcttcttcgactttttctttccttt 242
|||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 440 atcaaagtccctggcccattgtgttcgtttgccttgcttcttcgactttctctttccttt 381
Query: 243 ttcttcccttttccatgattacgattaccgatgcagtgctttttgattttatcatcaact 302
|||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 380 ttcttcccttttccatgattacaattaccgatgcagtgctttttaattttatcatcaact 321
Query: 303 atggtaacgatgatgcatgcaataagttaggatcagattaagtaaaggtgtctgtctctt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atggtaacgatgatgcatgcaataagttaggatcagattaagtaaaggtgtctgtctctt 261
Query: 363 ttgcttacgttttctgtttcctttgatttgtatatatat 401
|||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttgcttacgttttctgtttcctttgatttgtatatatat 222
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,413
Number of Sequences: 1807
Number of extensions: 16413
Number of successful extensions: 6552
Number of sequences better than 1.0e-20: 1
length of query: 432
length of database: 10,358,551
effective HSP length: 16
effective length of query: 416
effective length of database: 10,329,639
effective search space: 4297129824
effective search space used: 4297129824
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)